Class: disease or phenotypic feature

Either one of a disease or an individual phenotypic feature. Some knowledge resources such as Monarch treat these as distinct, others such as MESH conflate.

URI: http://w3id.org/biolink/vocab/DiseaseOrPhenotypicFeature

Mappings

Inheritance

• is_a: BiologicalEntity
• mixin: ThingWithTaxon - A mixin that can be used on any entity with a taxon

  Children

• Disease
• PhenotypicFeature

  Used in

• class: MolecularEntity biomarker for DiseaseOrPhenotypicFeature
• class: CellLineToDiseaseOrPhenotypicFeatureAssociation cell line to disease or phenotypic feature association.subject DiseaseOrPhenotypicFeature
• class: ChemicalToDiseaseOrPhenotypicFeatureAssociation chemical to disease or phenotypic feature association.object DiseaseOrPhenotypicFeature
• class: DiseaseOrPhenotypicFeatureAssociationToThingAssociation disease or phenotypic feature association to thing association.subject DiseaseOrPhenotypicFeature
• class: Gene gene associated with condition DiseaseOrPhenotypicFeature
• class: ThingToDiseaseOrPhenotypicFeatureAssociation thing to disease or phenotypic feature association.object DiseaseOrPhenotypicFeature
• class: Treatment treatment.treats DiseaseOrPhenotypicFeature
• class: Treatment treats DiseaseOrPhenotypicFeature

  Fields

• correlated with subsets: (translator_minimal)
  • Description: holds between a disease or phenotypic feature and a measurable molecular entity that is used as an indicator of the presence or state of the disease or feature.
  • range: MolecularEntity
  • Local
• has biomarker subsets: (translator_minimal)
  • Description: holds between a disease or phenotypic feature and a measurable molecular entity that is used as an indicator of the presence or state of the disease or feature.
  • range: MolecularEntity
  • Local
• treated by subsets: (translator_minimal)
  • Description: holds between a disease or phenotypic feature and a therapeutic process or chemical substance that is used to treat the condition
  • range: NamedThing
  • Local
• category subsets: (translator_minimal)
  • Description: Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the biolink entity type class. In a neo4j database this MAY correspond to the neo4j label tag
  • range: IriType*
  • inherited from: NamedThing
• description subsets: (translator_minimal)
  • Description: a human-readable description of a thing
  • range: NarrativeText
  • inherited from: NamedThing
• full name
  • Description: a long-form human readable name for a thing
  • range: LabelType
  • inherited from: NamedThing
• has phenotype subsets: (translator_minimal)
  • Description: holds between a biological entity and a phenotype, where a phenotype is construed broadly as any kind of quality of an organism part, a collection of these qualities, or a change in quality or qualities (e.g. abnormally increased temperature).
  • range: Phenotype
  • inherited from: BiologicalEntity
• id subsets: (translator_minimal)
  • Description: A unique identifier for a thing. Must be either a CURIE shorthand for a URI or a complete URI
  • range: IdentifierType
  • inherited from: NamedThing
• in taxon subsets: (translator_minimal)
  • Description: connects a thing to a class representing a taxon
  • range: OrganismTaxon
  • inherited from: ThingWithTaxon
• iri subsets: (translator_minimal)
  • Description: An IRI for the node. This is determined by the id using expansion rules.
  • range: IriType
  • inherited from: NamedThing
• name subsets: (translator_minimal)
  • Description: A human-readable name for a thing
  • range: LabelType
  • inherited from: NamedThing
• node property
  • Description: A grouping for any property that holds between a node and a value
  • range: string
  • inherited from: NamedThing
• related to
  • Description: A grouping for any relationship type that holds between any two things
  • range: NamedThing
  • inherited from: NamedThing
• systematic synonym
  • Description: more commonly used for gene symbols in yeast
  • range: LabelType
  • inherited from: NamedThing